C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | eukaryotic translation initiation factor 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000129830  |
Eif6-007 |
ENSMUSG00000027613 |
10090 | - |
2:155822837-155826436  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008EI | CIL_0008EI_0002 | VISTA | 2:155562263-156164147 |
| CIL_0002HV | CIL_0002HV_0002 | CGP | 2:155775342-155826925 |
| CIL_0002HS | CIL_0002HS_0002 | CGP | 2:155819832-155834854 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005638 | IDA | lamin filament |
| GO:0005882 | IDA | intermediate filament |
| GO:0042256 | IEA | mature ribosome assembly |
| GO:0043022 | IEA | ribosome binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000374436
|
EIF6-002 | protein_coding | Homo_sapiens | 0 | 501 |
|
ENST00000374443
|
EIF6-005 | protein_coding | Homo_sapiens | 0 | 628 |
|
ENST00000374450
|
EIF6-001 | protein_coding | Homo_sapiens | 0 | 501 |
|
ENST00000415116
|
EIF6-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 241 |
|
ENST00000440766
|
EIF6-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 499 |
|
ENST00000447927
|
EIF6-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 760 |
|
ENST00000462894
|
EIF6-006 | processed_transcript | Homo_sapiens | 0 | 324 |
|
ENST00000621148
|
EIF6-201 | protein_coding | Homo_sapiens | 0 | 501 |
