C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415681 NPM1P36-001 ENSG00000214604 9606 - 6:55939790-55940624 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLungENST00000415681
Transcript ID Breast Heart Kidney Lung
ENST00000415681 0.012±0.00 0.012±0.00 0.025±0.00 0.012±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075641 Npm1-001 protein_coding Mus_musculus 0 699
ENSMUST00000164523 Gm5611-201 protein_coding Mus_musculus 0 643
ENSMUST00000118871 Gm15484-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000172394 Gm17060-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000118047 Gm14681-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000093201 Npm1-006 protein_coding Mus_musculus 0 261
ENSMUST00000141881 Npm1-004 processed_transcript Mus_musculus 1e-31 141

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