C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: karyopherin (importin) alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145331 Kpna2-007 ENSMUSG00000018362 10090 - 11:106988629-106999440 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverOvaryTestisENSMUST00000145331
Transcript ID Breast Liver Ovary Testis
ENSMUST00000145331 4.710±1.21 4.018±0.10 6.252±3.14 6.560±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XS CIL_0001XS_0002 CGP 11:106820066-106999541
CIL_0000KI CIL_0000KI_0002 CGP 11:106988629-107132127

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IEA protein import into nucleus
GO:0008565 IEA protein transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330459 KPNA2-001 protein_coding Homo_sapiens 0 1633
ENST00000415694 RP11-417L14.1-001 processed_pseudogene Homo_sapiens 0 1157
ENST00000537025 KPNA2-002 protein_coding Homo_sapiens 0 1633
ENST00000583392 KPNA2-006 retained_intron Homo_sapiens 0 396
ENST00000584190 RP13-104F24.1-002 transcribed_unprocessed_pseudogene Homo_sapiens 0 604

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