C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: karyopherin (importin) alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018506 Kpna2-001 ENSMUSG00000018362 10090 - 11:106988629-106999541 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018506
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018506 12.232±7.06 11.769±5.81 12.861±1.09 36.501±28.70 8.503±6.13 38.192±16.25 17.367±1.49 6.781±4.04 43.431±48.56 12.643±5.73 4.359±0.91 11.824±7.87 32.388±21.81 69.246±33.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XS CIL_0001XS_0002 CGP 11:106820066-106999541
CIL_0000KI CIL_0000KI_0002 CGP 11:106988629-107132127

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IEA protein import into nucleus
GO:0008565 IEA protein transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330459 KPNA2-001 protein_coding Homo_sapiens 0 2023
ENST00000415694 RP11-417L14.1-001 processed_pseudogene Homo_sapiens 0 1157
ENST00000537025 KPNA2-002 protein_coding Homo_sapiens 0 1971
ENST00000583392 KPNA2-006 retained_intron Homo_sapiens 0 396
ENST00000584190 RP13-104F24.1-002 transcribed_unprocessed_pseudogene Homo_sapiens 0 604

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