| Transcript ID | Brain | Colon | Ovary | Testis |
|---|---|---|---|---|
| ENST00000417012 | 2.795±0.00 | 0.111±0.00 | 0.170±0.00 | 0.129±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | leucine rich repeat transmembrane neuronal 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000417012  |
LRRTM1-001 |
ENSG00000162951 |
9606 | - |
2:80288351-80304393  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003NY | CIL_0003NY_0001 | CGP | 2:79185231-80648861 |
| CIL_0004I9 | CIL_0004I9_0002 | CGP | 2:80288351-84460045 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005515 | IEA | protein binding |
| GO:0005783 | IDA | endoplasmic reticulum |
| GO:0008150 | ND | biological_process |
| GO:0016021 | IEA | integral component of membrane |
| GO:0030054 | IEA | cell junction |
| GO:0030424 | IDA | axon |
| GO:0030426 | IDA | growth cone |
| GO:0045211 | IEA | postsynaptic membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000159616
|
Lrrtm1-001 | protein_coding | Mus_musculus | 0 | 2987 |
|
ENSMUST00000020400
|
Lrrtm1-003 | nonsense_mediated_decay | Mus_musculus | 0 | 2987 |
|
ENSMUST00000161677
|
Lrrtm1-002 | protein_coding | Mus_musculus | 0 | 2968 |
|
ENSMUST00000161811
|
Lrrtm1-004 | protein_coding | Mus_musculus | 0 | 939 |
