C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-hydroxymethylcytosine (hmC) binding, ES cell-specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417226 HMCES-004 ENSG00000183624 9606 + 3:129278846-129305293 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleOvaryPlacentaTestisENST00000417226
Transcript ID Breast Liver Muscle Ovary Placenta Testis
ENST00000417226 1.445±0.00 1.371±0.00 4.053±0.00 2.747±1.73 2.471±0.43 9.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030Z CIL_00030Z_0001 CGP 3:129249606-129306186
CIL_000310 CIL_000310_0001 CGP 3:129278828-129316277

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113606 Hmces-002 protein_coding Mus_musculus 0 521
ENSMUST00000032141 Hmces-001 protein_coding Mus_musculus 0 521
ENSMUST00000124551 Hmces-004 processed_transcript Mus_musculus 3.9937e-43 180

Loading