C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00030Z_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000181789-ENSG00000183624 | CGP | 9606 | 3:129249606-129306186  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000181789  (COPG1)coatomer protein complex, subunit gamma 1 |
ENST00000314797 (COPG1-001)
|
129249606-129277773 | protein_coding | |
|
ENST00000504350 (COPG1-005)
|
129249653-129255040 | nonsense_mediated_decay | ||
|
ENST00000504547 (COPG1-015)
|
129260227-129265675 | retained_intron | ||
|
ENST00000509208 (COPG1-014)
|
129254327-129255039 | retained_intron | ||
|
ENST00000509889 (COPG1-008)
|
129265752-129277457 | protein_coding | ||
|
ENST00000512034 (COPG1-013)
|
129272853-129275183 | retained_intron | ||
|
ENST00000513410 (COPG1-009)
|
129263911-129267235 | retained_intron | ||
|
ENST00000513965 (COPG1-004)
|
129249627-129253098 | retained_intron | ||
|
ENST00000514478 (COPG1-006)
|
129272296-129277498 | nonsense_mediated_decay | ||
|
ENST00000515725 (COPG1-002)
|
129249632-129277771 | retained_intron | ||
|
ENSG00000183624 (HMCES) 5-hydroxymethylcytosine (hmC) binding, ES cell-specific |
ENST00000383463 (HMCES-001)
|
129278840-129306186 | protein_coding | |
|
ENST00000389735 (HMCES-002)
|
129278974-129305262 | protein_coding | ||
|
ENST00000417226 (HMCES-004)
|
129278846-129305293 | protein_coding | ||
|
ENST00000502878 (HMCES-003)
|
129278956-129305441 | protein_coding | ||
|
ENST00000509042 (HMCES-005)
|
129278828-129304751 | protein_coding | ||
|
ENST00000509551 (HMCES-009)
|
129278993-129302014 | protein_coding | ||
|
ENST00000510314 (HMCES-006)
|
129278880-129302134 | protein_coding | ||
|
ENST00000511665 (HMCES-007)
|
129279005-129302005 | protein_coding | ||
|
ENSG00000278658 (MIR6826) microRNA 6826 |
ENST00000617808 (MIR6826-201)
|
129272146-129272243 | miRNA | |
| CIL_00030Z_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000030058-ENSMUSG00000030060 | CGP | 10090 | 6:87887814-87936629 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000030058 (Copg1) coatomer protein complex, subunit gamma 1 |
ENSMUST00000049966 (Copg1-003)
|
87887928-87890759 | protein_coding | |
|
ENSMUST00000113607 (Copg1-001)
|
87887814-87913595 | protein_coding | ||
|
ENSMUST00000127614 (Copg1-008)
|
87908772-87910054 | processed_transcript | ||
|
ENSMUST00000132938 (Copg1-007)
|
87897803-87902766 | retained_intron | ||
|
ENSMUST00000137717 (Copg1-002)
|
87887957-87894962 | retained_intron | ||
|
ENSMUST00000149409 (Copg1-006)
|
87895456-87904867 | retained_intron | ||
|
ENSMUST00000149907 (Copg1-004)
|
87896006-87912530 | retained_intron | ||
|
ENSMUST00000152175 (Copg1-005)
|
87895116-87896102 | retained_intron | ||
|
ENSMUSG00000030060 (Hmces) 5-hydroxymethylcytosine (hmC) binding, ES cell specific |
ENSMUST00000032141 (Hmces-001)
|
87913935-87936629 | protein_coding | |
|
ENSMUST00000113606 (Hmces-002)
|
87914306-87936629 | protein_coding | ||
|
ENSMUST00000124551 (Hmces-004)
|
87917924-87933425 | processed_transcript | ||
|
ENSMUST00000132651 (Hmces-003)
|
87913958-87914981 | processed_transcript | ||
|
ENSMUST00000148914 (Hmces-005)
|
87932993-87936529 | retained_intron | ||
Expression Patterns
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