C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21 pseudogene 50
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417698 RPL21P50-001 ENSG00000228489 9606 - 4:123745750-123746226 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLungTestisENST00000417698
Transcript ID Adrenal Colon Lung Testis
ENST00000417698 0.081±0.00 0.082±0.00 0.025±0.00 0.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V2 CIL_0007V2_0001 VISTA 4:123162273-123765299
CIL_00099R CIL_00099R_0001 VISTA 4:123554659-124158375

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000120348 Gm12123-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000117320 Gm15578-001 unprocessed_pseudogene Mus_musculus 0 243
ENSMUST00000133080 Gm7799-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000119803 Gm14877-001 processed_pseudogene Mus_musculus 2e-32 143
ENSMUST00000120458 Gm7071-001 processed_pseudogene Mus_musculus 2e-27 126

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