C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15578
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117320 Gm15578-001 ENSMUSG00000083122 10090 + 3:156816037-156816511 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainOvaryENSMUST00000117320
Transcript ID Bladder Brain Ovary
ENSMUST00000117320 0.022±0.00 0.258±0.05 0.090±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WX CIL_0000WX_0002 CGP 3:156561794-157548390

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247219 TBPL2-001 protein_coding Homo_sapiens 0 220
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 459
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 459
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 459
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 459
ENST00000395517 RPL21P3-001 processed_pseudogene Homo_sapiens 0 370
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 453
ENST00000401418 RPL21P28-001 processed_pseudogene Homo_sapiens 0 448
ENST00000402896 RPL21P67-001 processed_pseudogene Homo_sapiens 0 320
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 0 431
ENST00000413752 RPL21P24-001 processed_pseudogene Homo_sapiens 0 187
ENST00000416102 AC017079.4-001 processed_pseudogene Homo_sapiens 0 327
ENST00000417698 RPL21P50-001 processed_pseudogene Homo_sapiens 0 243
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 0 409
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 403
ENST00000433345 RPL21P110-001 processed_pseudogene Homo_sapiens 0 198
ENST00000433493 RP5-859M6.1-001 processed_pseudogene Homo_sapiens 0 263
ENST00000434678 AC094019.4-001 unprocessed_pseudogene Homo_sapiens 0 244
ENST00000437709 RP11-466F5.4-001 processed_pseudogene Homo_sapiens 0 274
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 0 292
ENST00000443666 RPL21P133-001 processed_pseudogene Homo_sapiens 0 252
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 409
ENST00000454675 AC092155.1-001 processed_pseudogene Homo_sapiens 0 398
ENST00000456484 RP11-496H15.2-001 processed_pseudogene Homo_sapiens 9e-24 113
ENST00000459863 RPL21P41-001 processed_pseudogene Homo_sapiens 0 267
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 431
ENST00000463605 RPL21P39-001 processed_pseudogene Homo_sapiens 0 403
ENST00000465083 RPL21P8-001 processed_pseudogene Homo_sapiens 0 235
ENST00000465295 RP11-30K9.1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 305
ENST00000471411 RP11-615I16.1-001 processed_pseudogene Homo_sapiens 0 246
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 292
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 0 431
ENST00000472975 RP11-112N19.2-001 processed_pseudogene Homo_sapiens 0 377
ENST00000479171 RPL21P6-001 processed_pseudogene Homo_sapiens 0 220
ENST00000480465 RP11-492M23.2-001 processed_pseudogene Homo_sapiens 0 418
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 398
ENST00000482585 CTD-2036J7.1-001 unprocessed_pseudogene Homo_sapiens 1.99993e-41 172
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 379
ENST00000483765 RPL21-008 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000484462 RPL21P119-001 processed_pseudogene Homo_sapiens 0 444
ENST00000485147 RP11-407P2.1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000485756 RPL21-010 retained_intron Homo_sapiens 0 285
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 429
ENST00000487382 CTD-2158P22.1-001 processed_pseudogene Homo_sapiens 0 300
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 0 420
ENST00000488408 RPL21P42-001 processed_pseudogene Homo_sapiens 0 329
ENST00000491435 RP11-50D9.1-001 processed_pseudogene Homo_sapiens 0 435
ENST00000491732 RPL21P129-001 processed_pseudogene Homo_sapiens 0 296
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 392
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 364
ENST00000494303 RP11-366M4.1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 459
ENST00000496412 CTD-2290C23.2-001 processed_pseudogene Homo_sapiens 0 375
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 0 387
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 0 416

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