C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00099R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1525 VISTA 9606 4:123554659-124158375
GeneTranscriptPositionBiotype
ENSG00000226655 (AC096732.2)
 ENST00000439565 (AC096732.2-001) 123744923-123745673 lincRNA
ENSG00000228489 (RPL21P50)
ribosomal protein L21 pseudogene 50 		ENST00000417698 (RPL21P50-001) 123745750-123746226 processed_pseudogene
ENSG00000249464 (LINC01091)
long intergenic non-protein coding RNA 1091 		ENST00000508111 (LINC01091-002) 123650291-123930406 lincRNA
ENST00000511919 (LINC01091-003) 123650291-123930354 lincRNA
ENST00000514823 (LINC01091-001) 123650267-123666832 lincRNA
ENST00000515769 (LINC01091-004) 123774264-123865573 lincRNA
ENSG00000249837 (CTD-2325B11.1)
 ENST00000507299 (CTD-2325B11.1-001) 124149377-124252044 lincRNA
ENSG00000250484 (RP11-728C8.1)
 ENST00000424692 (RP11-728C8.1-001) 124062462-124062990 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00099R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1525 VISTA 10090 3:37594700-38198826
GeneTranscriptPositionBiotype
ENSMUSG00000037211 (Spry1)
sprouty homolog 1 (Drosophila) 		ENSMUST00000038569 (Spry1-001) 37639958-37644598 protein_coding
ENSMUST00000108107 (Spry1-003) 37640080-37644598 protein_coding
ENSMUST00000108109 (Spry1-002) 37639947-37644598 protein_coding
ENSMUSG00000058174 (Gm5148)
predicted gene 5148 		ENSMUST00000079755 (Gm5148-001) 37714190-37724410 protein_coding
ENSMUST00000099128 (Gm5148-003) 37714326-37724490 protein_coding
ENSMUST00000108105 (Gm5148-002) 37714198-37724329 protein_coding
ENSMUST00000134904 (Gm5148-004) 37718025-37724331 processed_transcript
ENSMUSG00000063001 (Rps23-ps1)
ribosomal protein S23, pseudogene 1 		ENSMUST00000077976 (Rps23-ps1-201) 37714717-37715212 pseudogene
ENSMUSG00000064315 (Rpl21-ps10)
ribosomal protein L21, pseudogene 10 		ENSMUST00000071237 (Rpl21-ps10-201) 38107440-38107922 processed_pseudogene
ENSMUSG00000081093 (Gm12565)
predicted gene 12565 		ENSMUST00000119004 (Gm12565-001) 37599424-37600072 processed_pseudogene
ENSMUSG00000085677 (4930594O21Rik)
RIKEN cDNA 4930594O21 gene 		ENSMUST00000129750 (4930594O21Rik-001) 37613923-37614826 lincRNA
ENSMUST00000144981 (4930594O21Rik-002) 37613913-37615276 lincRNA
ENSMUSG00000087457 (Gm7799)
predicted gene 7799 		ENSMUST00000133080 (Gm7799-001) 37959612-37960087 processed_pseudogene
ENSMUSG00000097304 (Rpl31-ps15)
ribosomal protein L31, pseudogene 15 		ENSMUST00000181857 (Rpl31-ps15-001) 37734730-37735104 processed_pseudogene
ENSMUSG00000100755 (Rps23-ps)
 ENSMUST00000116115 (Rps23-ps-001) 37714740-37715164 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00099R_0001ENSG00000226655ENST00000439565ENSG00000228489ENST00000417698ENSG00000249464ENST00000508111ENST00000511919ENST00000514823ENST00000515769ENSG00000249837ENST00000507299ENSG00000250484ENST00000424692CIL_00099R_0002ENSMUSG00000037211ENSMUST00000038569ENSMUST00000108107ENSMUST00000108109ENSMUSG00000058174ENSMUST00000079755ENSMUST00000099128ENSMUST00000108105ENSMUST00000134904ENSMUSG00000063001ENSMUST00000077976ENSMUSG00000064315ENSMUST00000071237ENSMUSG00000081093ENSMUST00000119004ENSMUSG00000085677ENSMUST00000129750ENSMUST00000144981ENSMUSG00000087457ENSMUST00000133080ENSMUSG00000097304ENSMUST00000181857ENSMUSG00000100755ENSMUST00000116115
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00099R_0001ENSG00000226655ENST00000439565ENSG00000228489ENST00000417698ENSG00000249464ENST00000508111ENST00000511919ENST00000514823ENST00000515769ENSG00000249837ENST00000507299ENSG00000250484ENST00000424692CIL_00099R_0002ENSMUSG00000037211ENSMUST00000038569ENSMUST00000108107ENSMUST00000108109ENSMUSG00000058174ENSMUST00000079755ENSMUST00000099128ENSMUST00000108105ENSMUST00000134904ENSMUSG00000063001ENSMUST00000077976ENSMUSG00000064315ENSMUST00000071237ENSMUSG00000081093ENSMUST00000119004ENSMUSG00000085677ENSMUST00000129750ENSMUST00000144981ENSMUSG00000087457ENSMUST00000133080ENSMUSG00000097304ENSMUST00000181857ENSMUSG00000100755ENSMUST00000116115
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000226655 ENST00000439565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.597±0.00 N/A 0.611±0.35
ENSG00000228489 ENST00000417698 N/A 0.081±0.00 N/A N/A N/A 0.082±0.00 N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.037±0.00
ENSG00000249464 ENST00000508111 N/A N/A N/A N/A 0.990±0.00 0.552±0.00 N/A N/A N/A 0.891±0.00 0.376±0.00 0.588±0.60 0.370±0.00 0.778±0.00
ENST00000511919 N/A N/A N/A 0.272±0.00 N/A 1.743±0.00 0.108±0.00 N/A N/A N/A N/A 0.488±0.22 0.400±0.19 0.347±0.00
ENST00000514823 0.015±0.00 0.040±0.00 N/A 0.016±0.00 0.131±0.00 0.007±0.00 0.028±0.02 N/A 0.008±0.00 0.014±0.00 N/A 0.037±0.02 0.035±0.00 N/A
ENST00000515769 N/A N/A 0.154±0.00 N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A
ENSG00000249837 ENST00000507299 N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A N/A N/A
ENSG00000250484 ENST00000424692 N/A 0.028±0.00 N/A 0.030±0.00 N/A N/A N/A 0.111±0.00 N/A 0.025±0.00 0.049±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037211 ENSMUST00000038569 12.584±4.50 10.545±2.45 11.604±0.17 2.985±0.91 7.262±1.46 6.877±0.70 5.184±2.65 9.687±2.63 1.603±1.19 24.250±4.73 4.984±2.37 7.593±3.24 2.681±1.33 N/A
ENSMUST00000108107 3.266±0.65 2.633±0.41 2.934±0.01 1.273±0.04 3.842±0.95 2.496±0.31 1.575±0.00 N/A 0.654±0.38 5.963±0.52 1.348±0.20 3.418±0.83 0.888±0.00 0.312±0.12
ENSMUST00000108109 5.493±2.88 4.302±1.15 4.310±0.24 1.163±0.53 7.264±5.15 3.765±0.62 4.211±0.92 8.595±2.82 1.248±0.95 17.905±5.70 6.401±1.75 6.300±2.14 1.684±0.83 1.088±0.57
ENSMUSG00000058174 ENSMUST00000079755 0.214±0.00 0.517±0.26 N/A 1.514±0.00 0.213±0.12 0.479±0.31 N/A 1.482±0.14 N/A 1.520±0.33 0.037±0.00 0.411±0.14 0.233±0.21 0.027±0.00
ENSMUST00000099128 0.243±0.00 N/A N/A N/A 0.204±0.10 0.186±0.00 0.028±0.00 0.619±0.03 N/A N/A 0.146±0.02 7.118±0.78 5.101±1.73 0.097±0.00
ENSMUST00000108105 N/A 0.586±0.06 0.648±0.00 N/A 0.161±0.00 0.353±0.15 N/A N/A N/A N/A N/A 0.217±0.08 0.297±0.00 N/A
ENSMUST00000134904 0.111±0.07 0.376±0.26 0.720±0.00 0.055±0.00 0.296±0.08 0.589±0.11 0.050±0.03 0.823±0.26 0.177±0.15 1.668±0.13 0.042±0.02 0.576±0.18 0.233±0.22 0.183±0.13
ENSMUSG00000063001 ENSMUST00000077976 N/A N/A N/A N/A N/A N/A N/A N/A 23.698±20.44 N/A 0.957±0.62 N/A N/A N/A
ENSMUSG00000064315 ENSMUST00000071237 0.125±0.00 N/A 0.046±0.00 0.221±0.00 N/A N/A 0.263±0.06 N/A 0.126±0.15 N/A 0.128±0.00 0.105±0.01 0.279±0.12 0.198±0.00
ENSMUSG00000081093 ENSMUST00000119004 N/A N/A 0.015±0.00 0.014±0.00 N/A N/A N/A N/A 0.015±0.01 N/A N/A 0.101±0.00 0.098±0.05 0.081±0.03
ENSMUSG00000085677 ENSMUST00000129750 N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A 5.531±1.43
ENSMUST00000144981 0.107±0.00 N/A N/A N/A 0.137±0.00 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A 1.020±0.00
ENSMUSG00000087457 ENSMUST00000133080 0.197±0.11 0.364±0.00 0.065±0.04 0.157±0.00 0.491±0.23 N/A N/A 0.176±0.06 N/A 0.316±0.19 N/A 0.551±0.19 0.090±0.00 0.083±0.00
ENSMUSG00000097304 ENSMUST00000181857 0.205±0.00 N/A 0.178±0.10 0.204±0.09 0.494±0.00 0.629±0.00 0.167±0.00 0.150±0.00 0.164±0.06 N/A N/A 0.433±0.12 0.937±1.14 0.926±1.00
ENSMUSG00000100755 ENSMUST00000116115 0.463±0.20 0.261±0.01 11.569±8.39 20.755±1.18 1.068±0.29 1.530±0.35 1.475±0.66 4.248±0.20 17.104±23.35 N/A 1.531±0.82 1.272±0.12 5.690±0.00 3.233±0.22

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