C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: laminin, beta 2 (laminin S)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418109 LAMB2-001 ENSG00000172037 9606 - 3:49121114-49133118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyMuscleOvaryTestisENST00000418109
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Muscle Ovary Testis
ENST00000418109 8.272±0.00 7.598±0.00 3.542±0.00 9.952±6.16 2.408±0.00 2.515±0.00 4.128±0.00 19.400±0.00 10.376±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005N5 CIL_0005N5_0002 CGP 3:49108046-49133118

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000904 IEA cell morphogenesis involved in differentiation
GO:0005178 IEA integrin binding
GO:0005198 NAS structural molecule activity
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005604 IDA basement membrane
GO:0005605 TAS basal lamina
GO:0005608 IPI laminin-3 complex
GO:0007155 IEA cell adhesion
GO:0007411 IEA axon guidance
GO:0007528 IEA neuromuscular junction development
GO:0007601 IEA visual perception
GO:0014002 IEA astrocyte development
GO:0014044 IEA Schwann cell development
GO:0030198 TAS extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0031175 IEA neuron projection development
GO:0043256 IEA laminin complex
GO:0043260 TAS laminin-11 complex
GO:0045202 IEA synapse
GO:0048677 IEA axon extension involved in regeneration
GO:0050808 IEA synapse organization
GO:0060041 IEA retina development in camera-type eye
GO:0070062 IDA extracellular vesicular exosome
GO:0072249 IEA metanephric glomerular visceral epithelial cell development
GO:0072274 IEA metanephric glomerular basement membrane development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065014 Lamb2-201 protein_coding Mus_musculus 0 5734
ENSMUST00000002979 Lamb1-001 protein_coding Mus_musculus 1e-23 117
ENSMUST00000169088 Lamb1-004 protein_coding Mus_musculus 1e-23 117

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