C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DMRT-like family A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418121 DMRTA2-001 ENSG00000142700 9606 - 1:50417550-50421632 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungMuscleOvaryTestisENST00000418121
Transcript ID Brain Breast Lung Muscle Ovary Testis
ENST00000418121 0.129±0.04 0.010±0.00 0.069±0.00 0.009±0.00 0.077±0.03 0.557±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063G CIL_00063G_0002 CGP 1:50048014-50423500
CIL_0008K0 CIL_0008K0_0001 VISTA 1:50240418-50841642
CIL_0008UT CIL_0008UT_0001 VISTA 1:50268874-50870617
CIL_0008US CIL_0008US_0001 VISTA 1:50333169-50934241
CIL_0009AC CIL_0009AC_0001 VISTA 1:50399523-51001114
CIL_00063F CIL_00063F_0002 CGP 1:50417550-50960263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061187 Dmrta2-001 protein_coding Mus_musculus 0 1807
ENSMUST00000052478 Dmrta1-001 protein_coding Mus_musculus 0 259
ENSMUST00000048935 Dmrt3-201 protein_coding Mus_musculus 6e-34 150

Loading