C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat and HMG-box DNA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420358 WDHD1-002 ENSG00000198554 9606 - 14:54941159-55027105 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000420358
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000420358 0.167±0.00 0.663±0.00 0.306±0.14 0.634±0.00 0.159±0.03 0.216±0.01 0.259±0.00 0.162±0.00 1.229±0.79 0.521±0.29 0.865±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000005 CIL_000005_0002 CGP 14:54842008-55027105
CIL_000603 CIL_000603_0002 CGP 14:54938950-55049488

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 TAS cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187531 Wdhd1-201 protein_coding Mus_musculus 0 3306
ENSMUST00000111791 Wdhd1-001 protein_coding Mus_musculus 0 3306
ENSMUST00000111792 Wdhd1-004 protein_coding Mus_musculus 0 2204
ENSMUST00000111790 Wdhd1-002 protein_coding Mus_musculus 0 1897
ENSMUST00000139124 Wdhd1-003 retained_intron Mus_musculus 0 540

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