C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HscB mitochondrial iron-sulfur cluster co-chaperone
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420442 HSCB-007 ENSG00000100209 9606 + 22:28742061-28757213 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartLungMuscleOvaryENST00000420442
Transcript ID Adipose Colon Heart Lung Muscle Ovary
ENST00000420442 1.610±0.00 3.644±0.00 1.438±0.00 2.144±0.00 0.928±0.00 7.220±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NO CIL_0008NO_0001 VISTA 22:28282570-28883176
CIL_0006WX CIL_0006WX_0002 CGP 22:28687743-28757515

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006457 IEA protein folding
GO:0051087 IEA chaperone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056937 Hscb-001 protein_coding Mus_musculus 0 558
ENSMUST00000144850 Hscb-003 nonsense_mediated_decay Mus_musculus 0 414
ENSMUST00000122921 Hscb-002 retained_intron Mus_musculus 0 300
ENSMUST00000145318 Hscb-004 protein_coding Mus_musculus 4.00001e-41 172

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