C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: HscB iron-sulfur cluster co-chaperone homolog (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145318 Hscb-004 ENSMUSG00000043510 10090 - 5:110829080-110839575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000145318
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000145318 2.215±0.00 4.901±0.00 4.050±0.76 1.994±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NO CIL_0008NO_0002 VISTA 5:110598210-111198771
CIL_0007W4 CIL_0007W4_0002 VISTA 5:110754482-111355796

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0006457 IEA protein folding
GO:0051087 IEA chaperone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216027 HSCB-001 protein_coding Homo_sapiens 4.99997e-41 172
ENST00000398941 HSCB-003 protein_coding Homo_sapiens 0 460
ENST00000420442 HSCB-007 nonsense_mediated_decay Homo_sapiens 4.00001e-41 172
ENST00000450178 HSCB-002 nonsense_mediated_decay Homo_sapiens 4.99997e-41 172
ENST00000483861 HSCB-005 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000495977 HSCB-006 processed_transcript Homo_sapiens 4.00001e-41 172

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