C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HscB iron-sulfur cluster co-chaperone homolog (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144850 Hscb-003 ENSMUSG00000043510 10090 - 5:110829080-110836320 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000144850
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000144850 4.664±0.00 1.109±0.00 8.756±1.84 11.366±5.44 4.565±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NO CIL_0008NO_0002 VISTA 5:110598210-111198771
CIL_0007W4 CIL_0007W4_0002 VISTA 5:110754482-111355796

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216027 HSCB-001 protein_coding Homo_sapiens 0 383
ENST00000398941 HSCB-003 protein_coding Homo_sapiens 2e-40 171
ENST00000420442 HSCB-007 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000450178 HSCB-002 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000483861 HSCB-005 processed_transcript Homo_sapiens 0 383
ENST00000495977 HSCB-006 processed_transcript Homo_sapiens 0 414

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