C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paired box 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420770 PAX7-002 ENSG00000009709 9606 + 1:18631521-18748866 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLungMuscleOvaryTestisENST00000420770
Transcript ID Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000420770 0.201±0.17 0.037±0.00 0.009±0.00 0.006±0.00 0.012±0.00 0.382±0.11 0.009±0.01 0.149±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Z CIL_00098Z_0001 VISTA 1:18089892-18691429
CIL_0008CW CIL_0008CW_0001 VISTA 1:18332177-18933790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0009653 TAS anatomical structure morphogenesis
GO:0043066 TAS negative regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174681 Pax7-002 protein_coding Mus_musculus 0 2049
ENSMUST00000030508 Pax7-001 protein_coding Mus_musculus 0 2010
ENSMUST00000004994 Pax3-002 protein_coding Mus_musculus 0 568
ENSMUST00000087086 Pax3-001 protein_coding Mus_musculus 0 562
ENSMUST00000172555 Pax3-003 processed_transcript Mus_musculus 0 381

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