C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of fused homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423559 SUFU-006 ENSG00000107882 9606 + 10:102504079-102618659 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonMuscleENST00000423559
Transcript ID Bladder Colon Muscle
ENST00000423559 0.274±0.00 0.324±0.00 0.190±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MQ CIL_0008MQ_0001 VISTA 10:102469546-103070739
CIL_0005WM CIL_0005WM_0001 CGP 10:102479229-102633535
CIL_00065X CIL_00065X_0001 CGP 10:102503987-102658407

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001501 TAS skeletal system development
GO:0003714 TAS transcription corepressor activity
GO:0004871 TAS signal transducer activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006508 TAS proteolysis
GO:0007165 TAS signal transduction
GO:0007275 TAS multicellular organismal development
GO:0008134 IDA transcription factor binding
GO:0019901 IPI protein kinase binding
GO:0042992 TAS negative regulation of transcription factor import into nucleus
GO:0043433 TAS negative regulation of sequence-specific DNA binding transcription factor activity
GO:0045668 TAS negative regulation of osteoblast differentiation
GO:0045879 TAS negative regulation of smoothened signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118440 Sufu-004 protein_coding Mus_musculus 0 1812
ENSMUST00000039922 Sufu-001 protein_coding Mus_musculus 0 1796
ENSMUST00000111867 Sufu-002 protein_coding Mus_musculus 0 1781
ENSMUST00000120778 Sufu-003 protein_coding Mus_musculus 0 957
ENSMUST00000123252 Sufu-006 processed_transcript Mus_musculus 0 307

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