C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H2A histone family, member Y
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423969 H2AFY-003 ENSG00000113648 9606 - 5:135334856-135399229 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLungENST00000423969
Transcript ID Adipose Adrenal Brain Breast Lung
ENST00000423969 49.447±0.00 34.342±0.00 38.909±0.00 26.787±0.00 36.278±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083J CIL_00083J_0001 VISTA 5:135133909-135736454

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137835 H2afy-008 retained_intron Mus_musculus 0 582
ENSMUST00000045788 H2afy-002 protein_coding Mus_musculus 0 582
ENSMUST00000016081 H2afy-001 protein_coding Mus_musculus 0 582
ENSMUST00000141589 H2afy-007 retained_intron Mus_musculus 0 399

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