C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H2A histone family, member Y
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141589 H2afy-007 ENSMUSG00000015937 10090 - 13:56074359-56090058 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000141589
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000141589 103.503±0.00 202.842±0.00 93.000±30.64 62.327±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AP CIL_0009AP_0002 VISTA 13:55516415-56118354
CIL_00083J CIL_00083J_0002 VISTA 13:55859018-56461187

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304332 H2AFY-004 protein_coding Homo_sapiens 0 584
ENST00000312469 H2AFY-002 protein_coding Homo_sapiens 0 401
ENST00000360597 H2AFY-008 processed_transcript Homo_sapiens 0 399
ENST00000423969 H2AFY-003 protein_coding Homo_sapiens 0 399
ENST00000432382 C5orf66-201 protein_coding Homo_sapiens 0 235
ENST00000451949 H2AFY-010 processed_transcript Homo_sapiens 0 396
ENST00000505827 H2AFY-023 retained_intron Homo_sapiens 0 267
ENST00000506671 H2AFY-006 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000510038 H2AFY-005 protein_coding Homo_sapiens 0 584
ENST00000511494 H2AFY-011 retained_intron Homo_sapiens 0 403
ENST00000511689 H2AFY-001 protein_coding Homo_sapiens 0 584
ENST00000512507 H2AFY-009 processed_transcript Homo_sapiens 0 643
ENST00000513268 H2AFY-018 retained_intron Homo_sapiens 2e-31 139
ENST00000624272 C5orf66-005 antisense Homo_sapiens 0 235

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