C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424692 RP11-728C8.1-001 ENSG00000250484 9606 + 4:124062462-124062990 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLungMuscleENST00000424692
Transcript ID Adrenal Brain Kidney Lung Muscle
ENST00000424692 0.028±0.00 0.030±0.00 0.111±0.00 0.025±0.00 0.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099R CIL_00099R_0001 VISTA 4:123554659-124158375

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 488
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 481
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 472
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 455
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 436
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 435
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 422
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 401
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 237
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 209
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 4.06377e-44 182
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 1e-19 100

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