C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synapsin II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425297 SYN2-006 ENSG00000157152 9606 + 3:12161545-12185377 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENST00000425297
Transcript ID Brain Placenta Testis
ENST00000425297 7.836±0.00 0.972±0.00 1.490±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SM CIL_0005SM_0001 CGP 3:11790442-12191400
CIL_0004U7 CIL_0004U7_0002 CGP 3:12004402-12191400

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169345 Syn2-202 protein_coding Mus_musculus 0 952
ENSMUST00000009538 Syn2-201 protein_coding Mus_musculus 0 798

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