C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled-coil domain containing 88A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426576 CCDC88A-005 ENSG00000115355 9606 - 2:55294173-55334345 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000426576
Transcript ID Testis
ENST00000426576 3.751±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z6 CIL_0000Z6_0002 CGP 2:55236595-55419921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0016477 IEA cell migration
GO:0032956 IEA regulation of actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040182 Ccdc88a-001 protein_coding Mus_musculus 0 2579
ENSMUST00000123561 Ccdc88a-002 protein_coding Mus_musculus 0 1676
ENSMUST00000140194 Ccdc88a-004 protein_coding Mus_musculus 0 1674
ENSMUST00000155854 Ccdc88a-003 protein_coding Mus_musculus 0 1552
ENSMUST00000144450 Ccdc88a-006 processed_transcript Mus_musculus 0 398

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