C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled coil domain containing 88A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140194 Ccdc88a-004 ENSMUSG00000032740 10090 + 11:29485979-29503518 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000140194
Transcript ID Liver
ENSMUST00000140194 0.203±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0016477 IEA cell migration
GO:0032956 IEA regulation of actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263630 CCDC88A-001 protein_coding Homo_sapiens 0 802
ENST00000336838 CCDC88A-002 protein_coding Homo_sapiens 0 1674
ENST00000412148 CCDC88A-006 protein_coding Homo_sapiens 0 802
ENST00000413716 CCDC88A-201 protein_coding Homo_sapiens 0 1674
ENST00000426576 CCDC88A-005 protein_coding Homo_sapiens 0 1674
ENST00000436346 CCDC88A-202 protein_coding Homo_sapiens 0 1674
ENST00000444458 CCDC88A-003 protein_coding Homo_sapiens 0 411
ENST00000456975 CCDC88A-008 protein_coding Homo_sapiens 0 802
ENST00000474059 CCDC88A-011 processed_transcript Homo_sapiens 0 287

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