C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic transcription factor 3 pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426582 BTF3P11-001 ENSG00000118903 9606 + 13:76928066-76928836 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000426582
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000426582 0.059±0.00 0.059±0.00 0.087±0.00 0.082±0.00 0.027±0.00 0.029±0.00 0.026±0.00 0.083±0.00 0.026±0.00 0.046±0.00 0.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000049 CIL_000049_0001 CGP 13:76880166-76958642

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134542 Btf3-003 protein_coding Mus_musculus 0 516
ENSMUST00000152704 Btf3-002 protein_coding Mus_musculus 0 516
ENSMUST00000022163 Btf3-001 protein_coding Mus_musculus 0 516
ENSMUST00000162698 Gm3531-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000133826 Btf3-004 retained_intron Mus_musculus 0 401
ENSMUST00000191444 RP23-130K20.4-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000119191 Gm15754-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000189001 RP23-247F18.2-001 processed_pseudogene Mus_musculus 2e-26 122

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