C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 3531
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162698 Gm3531-001 ENSMUSG00000089782 10090 - 1:97948901-97949389 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162698
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162698 1.413±0.40 0.641±0.49 1.918±0.26 0.693±0.55 1.196±0.45 1.182±1.04 0.921±0.68 1.380±0.59 1.670±0.88 0.911±0.33 0.161±0.04 0.503±0.31 0.129±0.08 3.637±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WC CIL_0007WC_0002 VISTA 1:97887842-98493251

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335895 BTF3-001 protein_coding Homo_sapiens 0 743
ENST00000380591 BTF3-002 protein_coding Homo_sapiens 0 743
ENST00000407097 BTF3P7-001 processed_pseudogene Homo_sapiens 0 597
ENST00000414577 BTF3P8-001 processed_pseudogene Homo_sapiens 0 503
ENST00000418784 BTF3P9-001 processed_pseudogene Homo_sapiens 0 357
ENST00000418852 BTF3P4-001 processed_pseudogene Homo_sapiens 0 647
ENST00000426582 BTF3P11-001 processed_pseudogene Homo_sapiens 0 510
ENST00000433415 BTF3P10-001 processed_pseudogene Homo_sapiens 0 660
ENST00000457252 BTF3P5-001 processed_pseudogene Homo_sapiens 0 601
ENST00000507081 BTF3-009 protein_coding Homo_sapiens 0 390
ENST00000508901 BTF3-007 retained_intron Homo_sapiens 0 662
ENST00000509708 BTF3-006 protein_coding Homo_sapiens 0 311
ENST00000510787 BTF3-005 retained_intron Homo_sapiens 0 274
ENST00000512257 BTF3-003 retained_intron Homo_sapiens 6e-25 119
ENST00000513224 BTF3P13-001 processed_pseudogene Homo_sapiens 0 614
ENST00000514360 BTF3-008 retained_intron Homo_sapiens 0 475
ENST00000514505 BTF3-010 processed_transcript Homo_sapiens 0 627
ENST00000519620 BTF3P12-001 processed_pseudogene Homo_sapiens 0 532
ENST00000519706 RP11-382J24.2-001 processed_pseudogene Homo_sapiens 0 446
ENST00000522014 RP11-11C20.1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000547436 BTF3P2-001 processed_pseudogene Homo_sapiens 0 540

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