C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427342 RP11-254B13.4-001 ENSG00000234040 9606 - 12:68626870-68627187 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000427342
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000427342 1.028±0.00 0.458±0.00 0.287±0.00 0.414±0.00 0.062±0.00 0.540±0.00 0.057±0.00 0.381±0.00 0.217±0.00 0.240±0.13 0.190±0.00 0.059±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 372
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 372
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 372
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 372
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000121144 Gm11450-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 339
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 331
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 0 305
ENSMUST00000117120 Rpl10-ps4-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 1.00053e-42 176
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 1e-36 156

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