C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11450
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121144 Gm11450-001 ENSMUSG00000082296 10090 + 2:162805590-162805922 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryPlacentaENSMUST00000121144
Transcript ID Breast Colon Ovary Placenta
ENSMUST00000121144 0.251±0.00 0.341±0.00 0.274±0.00 0.385±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E4 CIL_0004E4_0002 CGP 2:161521990-162937121

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325000 CTD-2192J16.15-001 processed_pseudogene Homo_sapiens 0 392
ENST00000344746 RPL10-001 protein_coding Homo_sapiens 0 398
ENST00000369817 RPL10-008 protein_coding Homo_sapiens 0 398
ENST00000406022 RPL10-011 protein_coding Homo_sapiens 0 398
ENST00000412093 RP11-465N4.2-001 processed_pseudogene Homo_sapiens 0 305
ENST00000424325 RPL10-201 protein_coding Homo_sapiens 0 398
ENST00000427342 RP11-254B13.4-001 processed_pseudogene Homo_sapiens 0 342
ENST00000436473 RPL10-015 protein_coding Homo_sapiens 0 353
ENST00000447844 RPL10P1-001 processed_pseudogene Homo_sapiens 0 302
ENST00000485196 RPL10-010 retained_intron Homo_sapiens 0 364
ENST00000491035 RPL10-005 retained_intron Homo_sapiens 0 399
ENST00000509131 CTC-431G16.3-001 processed_pseudogene Homo_sapiens 1.00053e-42 176
ENST00000522551 CTC-575D19.1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000522888 RP11-546B8.5-001 processed_pseudogene Homo_sapiens 0 353
ENST00000618723 RPL10-202 protein_coding Homo_sapiens 0 398

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