C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427600 RP11-543B16.1-001 ENSG00000234004 9606 + 1:211173488-211173849 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000427600
Transcript ID Adrenal Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000427600 0.039±0.00 0.040±0.00 0.139±0.02 0.036±0.00 0.115±0.00 0.036±0.00 0.069±0.00 0.077±0.02 0.172±0.00 0.168±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080300 Rps25-201 protein_coding Mus_musculus 0 385
ENSMUST00000119876 Rps25-ps1-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000116078 Gm12643-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000072718 Gm4963-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000137940 Gm16288-001 processed_pseudogene Mus_musculus 0 300

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