C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Rap guanine nucleotide exchange factor (GEF) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427994 RAPGEF1-004 ENSG00000107263 9606 - 9:131638709-131709842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000427994
Transcript ID Heart
ENST00000427994 2.677±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0001 VISTA 9:131030990-131632063
CIL_0002EB CIL_0002EB_0002 CGP 9:131576770-132079908

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102872 Rapgef1-001 protein_coding Mus_musculus 0 756
ENSMUST00000095087 Rapgef1-007 protein_coding Mus_musculus 0 756
ENSMUST00000147755 Rapgef1-003 nonsense_mediated_decay Mus_musculus 0 364
ENSMUST00000091146 Rapgef1-004 protein_coding Mus_musculus 0 364

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