C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428361 CTDSP1-011 ENSG00000144579 9606 + 2:218400308-218404479 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000428361
Transcript ID Muscle
ENST00000428361 1.124±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VF CIL_0005VF_0001 CGP 2:218382029-218405941
CIL_000650 CIL_000650_0001 CGP 2:218398256-218453295

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027367 Ctdsp1-001 protein_coding Mus_musculus 0 1024
ENSMUST00000141175 Ctdsp1-002 retained_intron Mus_musculus 0 819
ENSMUST00000152659 Ctdsp1-003 protein_coding Mus_musculus 0 442

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