C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428553 RP11-864N7.2-001 ENSG00000227615 9606 - 11:74745716-74746114 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000428553
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000428553 0.188±0.00 0.686±0.00 0.159±0.00 0.346±0.00 0.323±0.00 0.073±0.00 0.346±0.00 0.175±0.00 0.476±0.00 0.328±0.13 1.825±2.01 0.146±0.01 0.746±0.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183090 Rps12l1-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000073926 Rps12-201 protein_coding Mus_musculus 0 545
ENSMUST00000086764 Rps12-ps3-201 protein_coding Mus_musculus 0 545
ENSMUST00000119773 Rps12-ps19-001 processed_pseudogene Mus_musculus 0 523
ENSMUST00000121168 Rps12-ps20-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000179414 Rps12-ps23-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000179382 Rps12-ps22-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000178172 Rps12-ps21-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000182321 Rps12l2-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000168843 Gm4925-002 processed_transcript Mus_musculus 0 444
ENSMUST00000092231 Gm4925-001 transcribed_processed_pseudogene Mus_musculus 0 442

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