C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073926 Rps12-201 ENSMUSG00000061983 10090 - 10:23785211-23787195 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073926
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073926 1816.515±725.77 1004.502±130.60 2411.305±194.16 728.455±741.26 1610.111±572.33 2421.216±1012.43 623.412±182.05 1116.256±435.46 2061.425±1728.89 1508.848±495.05 370.563±36.14 2673.902±738.04 1534.601±688.28 703.745±337.99

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0016020 IEA membrane
GO:0022627 IEA cytosolic small ribosomal subunit
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230050 RPS12-001 protein_coding Homo_sapiens 0 630
ENST00000407698 RP11-812I20.2-001 processed_pseudogene Homo_sapiens 0 318
ENST00000414823 AC009413.2-001 processed_pseudogene Homo_sapiens 0 501
ENST00000415024 RP11-313E4.1-001 processed_pseudogene Homo_sapiens 0 309
ENST00000419579 RPS12P23-001 processed_pseudogene Homo_sapiens 0 483
ENST00000428553 RP11-864N7.2-001 processed_pseudogene Homo_sapiens 0 545
ENST00000440335 RP11-613F7.1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000442381 RPS12P18-001 processed_pseudogene Homo_sapiens 0 307
ENST00000461060 RP11-621K7.1-001 processed_pseudogene Homo_sapiens 0 470
ENST00000463278 CTC-398G3.2-001 processed_pseudogene Homo_sapiens 0 514
ENST00000464109 RPS12P20-001 processed_pseudogene Homo_sapiens 5.99994e-41 171
ENST00000484182 RP11-538P18.1-001 processed_pseudogene Homo_sapiens 0 224
ENST00000484616 RPS12-002 retained_intron Homo_sapiens 0 285
ENST00000492017 RPS12P26-001 transcribed_processed_pseudogene Homo_sapiens 0 457
ENST00000616756 RP11-174N3.4-001 processed_pseudogene Homo_sapiens 0 226

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