C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429127 RP11-69M1.3-001 ENSG00000255964 9606 + 12:8015024-8016406 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverOvaryTestisENST00000429127
Transcript ID Brain Breast Heart Liver Ovary Testis
ENST00000429127 0.055±0.00 0.011±0.00 0.010±0.00 0.010±0.00 0.018±0.00 0.207±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001D CIL_00001D_0001 CGP 12:7919230-8055503

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119713 Gm12141-001 processed_pseudogene Mus_musculus 0 1230
ENSMUST00000027123 Hspd1-001 protein_coding Mus_musculus 0 1230
ENSMUST00000121815 Gm12725-001 processed_pseudogene Mus_musculus 0 959
ENSMUST00000127861 Hspd1-002 protein_coding Mus_musculus 0 749
ENSMUST00000122013 Gm12608-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000121528 Gm14935-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000144077 Hspd1-003 protein_coding Mus_musculus 0 507
ENSMUST00000189212 RP23-274N9.1-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000120603 Gm14465-001 processed_pseudogene Mus_musculus 0 459

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