C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GTPase activating protein, alpha subunit 2 (catalytic)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430436 RALGAPA2-002 ENSG00000188559 9606 - 20:20389552-20639900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000430436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000430436 4.480±0.00 2.545±0.00 1.674±0.00 0.471±0.20 3.312±1.65 1.549±0.00 0.449±0.00 4.825±0.69 2.695±0.98 4.826±1.31 2.917±0.00 3.113±2.23 3.190±0.50 2.734±1.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R6 CIL_0007R6_0001 VISTA 20:20192309-20793556
CIL_0001TW CIL_0001TW_0001 CGP 20:20368121-20712488
CIL_0007A2 CIL_0007A2_0002 CGP 20:20389552-21246622

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005488 IEA binding
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131824 Ralgapa2-007 protein_coding Mus_musculus 0 5923
ENSMUST00000149499 Ralgapa2-008 protein_coding Mus_musculus 0 5308
ENSMUST00000109986 Ralgapa2-001 protein_coding Mus_musculus 0 3797
ENSMUST00000146307 Ralgapa2-005 nonsense_mediated_decay Mus_musculus 0 3166
ENSMUST00000109982 Ralgapa2-003 retained_intron Mus_musculus 0 2071
ENSMUST00000135974 Ralgapa2-006 retained_intron Mus_musculus 0 1476
ENSMUST00000148784 Ralgapa2-004 retained_intron Mus_musculus 0 876
ENSMUST00000124583 Ralgapa2-002 processed_transcript Mus_musculus 7e-38 165

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