C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 20702
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176181 Gm20702-001 ENSMUSG00000093437 10090 + 12:101906080-101906539 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000176181
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000176181 0.465±0.11 0.345±0.15 0.250±0.02 0.264±0.08 0.293±0.08 0.314±0.10 0.347±0.09 0.280±0.08 0.244±0.20 0.507±0.03 0.640±0.23 0.228±0.10 0.345±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LX CIL_0002LX_0003 CGP 12:101746565-101913267

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 298
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000425197 RPL29P19-001 processed_pseudogene Homo_sapiens 0 220
ENST00000431445 AC087650.1-001 processed_pseudogene Homo_sapiens 0 254
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 237
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 276
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 292
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 196
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 254
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 0 200
ENST00000465069 RPL29P25-001 processed_pseudogene Homo_sapiens 0 198
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 0 224
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 298
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 298
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 298
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 298
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 3e-17 94
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 3e-18 97
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 2e-31 139
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.000000001 68
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 235
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 298
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 292
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 298
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 2e-32 143

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