C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L10 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431607 RPL10P3-001 ENSG00000230734 9606 - 9:117180628-117181095 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000431607
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000431607 1.222±0.00 0.750±0.00 0.570±0.20 1.566±0.56 0.648±0.53 0.333±0.03 0.784±0.40 0.222±0.00 0.585±0.15 3.862±2.54 1.540±1.91 2.322±2.20 0.769±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FO CIL_0004FO_0001 CGP 9:116153804-117415070
CIL_0004FP CIL_0004FP_0001 CGP 9:116425225-117415070
CIL_0004FM CIL_0004FM_0001 CGP 9:116687302-117716871

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 409
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 409
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 409
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 401
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 368
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 0 363
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 357
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 0 206
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 5.00264e-43 178

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