C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA polymerase II associated protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432584 RPAP3-002 ENSG00000005175 9606 - 12:47663292-47706026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000432584
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000432584 0.871±0.00 2.952±0.00 1.701±0.64 0.877±0.39 0.638±0.00 1.202±0.97 2.301±1.17 1.286±0.27 1.053±0.00 2.232±2.04 3.937±1.11 1.821±1.48 4.714±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YR CIL_0005YR_0001 CGP 12:47079603-47706061
CIL_0005YS CIL_0005YS_0001 CGP 12:47661249-47725567

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023104 Rpap3-201 protein_coding Mus_musculus 0 1404
ENSMUST00000122295 Gm5697-001 processed_pseudogene Mus_musculus 0 1033

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