C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Bardet-Biedl syndrome 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433714 BBS9-002 ENSG00000122507 9606 + 7:33129562-33605632 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000433714
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000433714 0.356±0.00 1.263±0.00 1.423±0.00 1.554±0.42 1.901±0.00 0.661±0.00 2.091±0.00 0.233±0.00 1.551±0.00 0.592±0.00 0.924±0.23 0.979±0.39 4.250±1.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FH CIL_0003FH_0001 CGP 7:33129244-34155872

Gene Ontology

GO IDEvidence TypeGO Description
GO:0034464 IEA BBSome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000147712 Bbs9-002 protein_coding Mus_musculus 0 1345
ENSMUST00000150395 Bbs9-003 protein_coding Mus_musculus 0 1321
ENSMUST00000039798 Bbs9-001 protein_coding Mus_musculus 0 1321
ENSMUST00000147405 Bbs9-004 protein_coding Mus_musculus 0 1310
ENSMUST00000127296 Bbs9-005 nonsense_mediated_decay Mus_musculus 0 1170
ENSMUST00000130479 Bbs9-006 retained_intron Mus_musculus 0 431
ENSMUST00000136084 Bbs9-011 protein_coding Mus_musculus 0 255
ENSMUST00000152719 Bbs9-009 processed_transcript Mus_musculus 0 691
ENSMUST00000137547 Bbs9-010 processed_transcript Mus_musculus 0 501

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