C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Bardet-Biedl syndrome 9 (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127296 Bbs9-005 ENSMUSG00000035919 10090 + 9:22643841-22888280 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000127296
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127296 1.557±0.00 1.183±0.00 1.675±0.00 2.349±1.00 1.175±0.30 1.601±0.00 0.589±0.10 2.213±0.00 0.686±0.17 2.882±0.55 1.377±0.32 13.811±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FH CIL_0003FH_0002 CGP 9:22475715-23485202

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0034464 IDA BBSome
GO:0036064 ISO ciliary basal body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242067 BBS9-004 protein_coding Homo_sapiens 0 1170
ENST00000350941 BBS9-001 protein_coding Homo_sapiens 0 1120
ENST00000355070 BBS9-005 protein_coding Homo_sapiens 0 1120
ENST00000396127 BBS9-003 protein_coding Homo_sapiens 0 1120
ENST00000433714 BBS9-002 nonsense_mediated_decay Homo_sapiens 0 1170
ENST00000434373 BBS9-006 protein_coding Homo_sapiens 0 1140
ENST00000496029 BBS9-011 processed_transcript Homo_sapiens 0 257

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