C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 6A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433797 KDM6A-003 ENSG00000147050 9606 + X:45060057-45112602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverOvaryPlacentaTestisENST00000433797
Transcript ID Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENST00000433797 0.418±0.00 0.655±0.00 0.393±0.00 1.256±0.00 0.734±0.00 1.238±0.00 0.711±0.11 1.398±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QA CIL_0005QA_0001 CGP X:44844004-45112602
CIL_0003JA CIL_0003JA_0002 CGP X:44873177-45200901

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044484 Kdm6a-001 protein_coding Mus_musculus 0 6156
ENSMUST00000052368 Kdm6a-002 protein_coding Mus_musculus 0 6076
ENSMUST00000130978 Kdm6a-003 retained_intron Mus_musculus 0 2368
ENSMUST00000154004 Uty-005 protein_coding Mus_musculus 0 2006
ENSMUST00000139365 Uty-004 protein_coding Mus_musculus 0 2006
ENSMUST00000069309 Uty-001 protein_coding Mus_musculus 0 2006
ENSMUST00000154666 Uty-007 nonsense_mediated_decay Mus_musculus 0 2006
ENSMUST00000143286 Uty-008 protein_coding Mus_musculus 0 2006
ENSDART00000088469 kdm6a-201 protein_coding Danio_rerio 0 948
ENSDART00000144623 kdm6a-001 protein_coding Danio_rerio 0 948
ENSMUST00000143958 Uty-002 nonsense_mediated_decay Mus_musculus 0 747
ENSMUST00000155161 Kdm6a-004 retained_intron Mus_musculus 0 468
ENSMUST00000133976 Uty-009 retained_intron Mus_musculus 5e-22 111
ENSMUST00000185837 Uty-012 retained_intron Mus_musculus 1e-39 169

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