C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 142
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433921 ZNF142-004 ENSG00000115568 9606 - 2:218638145-218659502 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000433921
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000433921 1.787±0.00 1.679±0.00 4.619±0.00 0.926±0.00 0.374±0.00 1.216±0.00 0.416±0.00 3.480±1.03 1.523±0.00 4.317±1.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AR CIL_0000AR_0002 CGP 2:218607765-218659655
CIL_0000AQ CIL_0000AQ_0002 CGP 2:218637916-218663443

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156613 Zfp142-005 nonsense_mediated_decay Mus_musculus 0 2933
ENSMUST00000027315 Zfp142-008 protein_coding Mus_musculus 0 2630
ENSMUST00000113737 Zfp142-001 protein_coding Mus_musculus 0 2630
ENSMUST00000127921 Zfp142-003 nonsense_mediated_decay Mus_musculus 0 2567
ENSMUST00000066986 Zfp142-004 protein_coding Mus_musculus 0 2475
ENSMUST00000067916 Plcd4-201 protein_coding Mus_musculus 0 678
ENSMUST00000113749 Plcd4-202 protein_coding Mus_musculus 0 678
ENSMUST00000141412 Plcd4-003 nonsense_mediated_decay Mus_musculus 0 678
ENSMUST00000130112 Zfp142-002 retained_intron Mus_musculus 0 298
ENSMUST00000136865 Zfp142-006 retained_intron Mus_musculus 0 298

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