C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase C, delta 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141412 Plcd4-003 ENSMUSG00000026173 10090 + 1:74542888-74567794 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000651 CIL_000651_0002 CGP 1:74409376-74544284
CIL_00064Y CIL_00064Y_0002 CGP 1:74435511-74544284
CIL_00066C CIL_00066C_0002 CGP 1:74506058-74567794
CIL_0000AR CIL_0000AR_0003 CGP 1:74542888-74588246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004435 IEA phosphatidylinositol phospholipase C activity
GO:0004629 TAS phospholipase C activity
GO:0005509 IEA calcium ion binding
GO:0005622 IDA intracellular
GO:0007165 TAS signal transduction
GO:0007340 IMP acrosome reaction
GO:0016042 IEA lipid catabolic process
GO:0035556 IEA intracellular signal transduction
GO:0046488 TAS phosphatidylinositol metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000411696 ZNF142-201 protein_coding Homo_sapiens 0 682
ENST00000415854 PLCD4-011 protein_coding Homo_sapiens 0 311
ENST00000417849 PLCD4-006 protein_coding Homo_sapiens 0 1110
ENST00000432688 PLCD4-007 protein_coding Homo_sapiens 0 1116
ENST00000433921 ZNF142-004 nonsense_mediated_decay Homo_sapiens 0 678
ENST00000449707 ZNF142-001 protein_coding Homo_sapiens 0 689
ENST00000450765 ZNF142-002 nonsense_mediated_decay Homo_sapiens 0 678
ENST00000450993 PLCD4-001 protein_coding Homo_sapiens 0 1110
ENST00000459791 PLCD4-008 retained_intron Homo_sapiens 0 339
ENST00000469493 PLCD4-003 retained_intron Homo_sapiens 0 830
ENST00000473443 PLCD4-004 retained_intron Homo_sapiens 0 617
ENST00000483685 PLCD4-002 retained_intron Homo_sapiens 0 612

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