C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intraflagellar transport 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433985 IFT27-201 ENSG00000100360 9606 - 22:36758203-36776133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000433985
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000433985 3.760±0.00 4.573±0.00 6.559±1.98 4.784±3.63 5.166±4.44 5.270±4.49 7.437±6.12 8.077±0.00 12.218±0.00 2.240±1.38 11.186±7.63 7.984±3.20 10.134±5.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006F7 CIL_0006F7_0002 CGP 22:36563921-36776256
CIL_0005SS CIL_0005SS_0001 CGP 22:36758202-36819479

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005813 IEA centrosome
GO:0005929 IEA cilium
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0030992 ISS intraciliary transport particle B
GO:0031514 ISS motile cilium
GO:0097225 IEA sperm midpiece
GO:0097228 IEA sperm principal piece

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016781 Ift27-201 protein_coding Mus_musculus 0 595

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