C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Bardet-Biedl syndrome 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434373 BBS9-006 ENSG00000122507 9606 + 7:33344607-33605626 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaENST00000434373
Transcript ID Adipose Adrenal Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000434373 0.507±0.00 0.703±0.00 1.115±0.00 2.331±0.00 0.919±0.43 0.891±0.56 0.815±0.54 1.256±0.00 0.371±0.00 2.040±0.00 1.303±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FH CIL_0003FH_0001 CGP 7:33129244-34155872

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000147405 Bbs9-004 protein_coding Mus_musculus 0 1280
ENSMUST00000147712 Bbs9-002 protein_coding Mus_musculus 0 1190
ENSMUST00000150395 Bbs9-003 protein_coding Mus_musculus 0 1190
ENSMUST00000039798 Bbs9-001 protein_coding Mus_musculus 0 1190
ENSMUST00000127296 Bbs9-005 nonsense_mediated_decay Mus_musculus 0 1140
ENSMUST00000130479 Bbs9-006 retained_intron Mus_musculus 0 431
ENSMUST00000136084 Bbs9-011 protein_coding Mus_musculus 0 268

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