C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein p63
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434928 TP63-007 ENSG00000073282 9606 + 3:189789675-189864268 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverOvaryENST00000434928
Transcript ID Adrenal Brain Liver Ovary
ENST00000434928 0.533±0.00 0.348±0.00 6.637±0.00 2.236±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Y5 CIL_0003Y5_0002 CGP 3:188947214-189897279
CIL_000933 CIL_000933_0001 VISTA 3:189215860-189816512
CIL_0000DP CIL_0000DP_0001 CGP 3:189631416-190122437

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0044212 IEA transcription regulatory region DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115305 Trp63-006 protein_coding Mus_musculus 0 523
ENSMUST00000115304 Trp63-005 protein_coding Mus_musculus 0 523
ENSMUST00000115306 Trp63-002 protein_coding Mus_musculus 0 523
ENSMUST00000040231 Trp63-001 protein_coding Mus_musculus 0 523
ENSMUST00000065523 Trp63-201 protein_coding Mus_musculus 0 363
ENSMUST00000115308 Trp63-202 protein_coding Mus_musculus 0 363
ENSMUST00000115307 Trp63-004 protein_coding Mus_musculus 0 363
ENSMUST00000115310 Trp63-003 protein_coding Mus_musculus 0 363

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