C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000DP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000073282-ENSG00000090530 CGP 9606 3:189631416-190122437
GeneTranscriptPositionBiotype
ENSG00000073282 (TP63)
tumor protein p63 		ENST00000264731 (TP63-001) 189631427-189897279 protein_coding
ENST00000320472 (TP63-003) 189631488-189894702 protein_coding
ENST00000354600 (TP63-004) 189789660-189897268 protein_coding
ENST00000392460 (TP63-010) 189631516-189894221 protein_coding
ENST00000392461 (TP63-015) 189789801-189894231 protein_coding
ENST00000392463 (TP63-011) 189789801-189894221 protein_coding
ENST00000418709 (TP63-002) 189631488-189881496 protein_coding
ENST00000434928 (TP63-007) 189789675-189864268 protein_coding
ENST00000437221 (TP63-009) 189789801-189881496 protein_coding
ENST00000440651 (TP63-008) 189631516-189894502 protein_coding
ENST00000449992 (TP63-012) 189789801-189894502 protein_coding
ENST00000456148 (TP63-013) 189789801-189894502 protein_coding
ENST00000460036 (TP63-005) 189789695-189873575 retained_intron
ENST00000486398 (TP63-006) 189631416-189738896 retained_intron
ENSG00000090530 (LEPREL1)
leprecan-like 1 		ENST00000319332 (LEPREL1-001) 189956728-190120929 protein_coding
ENST00000426003 (LEPREL1-003) 189988915-190121678 protein_coding
ENST00000427335 (LEPREL1-002) 189956831-190122437 protein_coding
ENST00000444866 (LEPREL1-004) 189988907-190116648 protein_coding
ENST00000463171 (LEPREL1-010) 189963459-189971927 retained_intron
ENST00000467131 (LEPREL1-008) 189964050-189973184 retained_intron
ENST00000470925 (LEPREL1-005) 189974568-189987765 retained_intron
ENST00000475095 (LEPREL1-006) 189974573-189983484 retained_intron
ENST00000482780 (LEPREL1-007) 189971548-189974190 retained_intron
ENST00000490940 (LEPREL1-009) 189957697-189964121 retained_intron
ENSG00000225764 (LEPREL1-AS1)
LEPREL1 antisense RNA 1 		ENST00000412203 (LEPREL1-AS1-001) 190120964-190144846 antisense
ENSG00000230077 (MTAPP2)
methylthioadenosine phosphorylase pseudogene 2 		ENST00000437063 (MTAPP2-001) 189969030-189969861 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0000DP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022510-ENSMUSG00000038168 CGP 10090 16:25683763-26105784
GeneTranscriptPositionBiotype
ENSMUSG00000022510 (Trp63)
transformation related protein 63 		ENSMUST00000040231 (Trp63-001) 25801916-25892102 protein_coding
ENSMUST00000065523 (Trp63-201) 25683765-25892087 protein_coding
ENSMUST00000115304 (Trp63-005) 25801916-25867854 protein_coding
ENSMUST00000115305 (Trp63-006) 25801916-25877144 protein_coding
ENSMUST00000115306 (Trp63-002) 25801916-25892102 protein_coding
ENSMUST00000115307 (Trp63-004) 25683763-25821318 protein_coding
ENSMUST00000115308 (Trp63-202) 25683765-25877144 protein_coding
ENSMUST00000115310 (Trp63-003) 25683765-25892102 protein_coding
ENSMUSG00000038168 (Leprel1)
leprecan-like 1 		ENSMUST00000039990 (Leprel1-001) 25959288-26105784 protein_coding
ENSMUST00000159161 (Leprel1-002) 25997161-26014593 processed_transcript
ENSMUST00000160067 (Leprel1-004) 25972282-25985174 retained_intron
ENSMUST00000161878 (Leprel1-003) 25985504-25992791 processed_transcript
ENSMUSG00000090203 (AU015336)
expressed sequence AU015336 		ENSMUST00000159040 (AU015336-001) 26031810-26040870 sense_intronic
ENSMUSG00000090257 (Gm4524)
predicted gene 4524 		ENSMUST00000161614 (Gm4524-001) 25956475-25960342 antisense
ENSMUSG00000098103 (Gm27005)
predicted gene, 27005 		ENSMUST00000182783 (Gm27005-001) 25726696-25727616 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DP_0001ENSG00000073282ENST00000264731ENST00000320472ENST00000354600ENST00000392460ENST00000392461ENST00000392463ENST00000418709ENST00000434928ENST00000437221ENST00000440651ENST00000449992ENST00000456148ENST00000460036ENST00000486398ENSG00000090530ENST00000319332ENST00000426003ENST00000427335ENST00000444866ENST00000463171ENST00000467131ENST00000470925ENST00000475095ENST00000482780ENST00000490940ENSG00000225764ENST00000412203ENSG00000230077ENST00000437063CIL_0000DP_0002ENSMUSG00000022510ENSMUST00000040231ENSMUST00000065523ENSMUST00000115304ENSMUST00000115305ENSMUST00000115306ENSMUST00000115307ENSMUST00000115308ENSMUST00000115310ENSMUSG00000038168ENSMUST00000039990ENSMUST00000159161ENSMUST00000160067ENSMUST00000161878ENSMUSG00000090203ENSMUST00000159040ENSMUSG00000090257ENSMUST00000161614ENSMUSG00000098103ENSMUST00000182783
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DP_0001ENSG00000073282ENST00000264731ENST00000320472ENST00000354600ENST00000392461ENST00000418709ENST00000434928ENST00000437221ENST00000440651ENST00000449992ENST00000456148ENST00000460036ENSG00000090530ENST00000319332ENST00000427335ENST00000444866ENST00000467131ENST00000470925ENST00000490940ENSG00000225764ENST00000412203ENSG00000230077ENST00000437063CIL_0000DP_0002ENSMUSG00000022510ENSMUST00000040231ENSMUST00000065523ENSMUST00000115304ENSMUST00000115305ENSMUST00000115306ENSMUST00000115308ENSMUST00000115310ENSMUSG00000038168ENSMUST00000039990ENSMUST00000159161ENSMUST00000160067ENSMUST00000161878ENSMUSG00000090203ENSMUST00000159040ENSMUSG00000090257ENSMUST00000161614ENSMUSG00000098103ENSMUST00000182783
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073282 ENST00000264731 N/A N/A N/A N/A 0.446±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.046±0.07
ENST00000320472 N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000354600 N/A N/A N/A 0.011±0.00 2.347±0.00 0.018±0.00 N/A 0.066±0.00 0.511±0.51 0.749±0.00 N/A 1.544±0.60 2.444±1.07 1.399±0.00
ENST00000392460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392461 N/A N/A N/A 0.069±0.00 N/A N/A N/A 0.088±0.00 2.729±0.00 N/A N/A N/A N/A N/A
ENST00000392463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.102±0.00 N/A N/A N/A
ENST00000434928 N/A 0.533±0.00 N/A 0.348±0.00 N/A N/A N/A N/A 6.637±0.00 N/A N/A 2.236±0.00 N/A N/A
ENST00000437221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.812±6.10 N/A N/A N/A
ENST00000440651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.238±0.00
ENST00000449992 N/A N/A N/A 0.253±0.00 N/A 0.193±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.305±0.00 1.232±0.00 2.681±0.00 N/A
ENST00000460036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.599±0.00 N/A N/A
ENST00000486398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000090530 ENST00000319332 1.355±0.00 1.794±0.00 4.307±0.00 0.571±0.00 2.531±0.00 1.634±1.17 0.572±0.00 19.800±18.91 0.352±0.15 5.791±1.56 0.151±0.00 7.238±4.43 5.166±1.09 2.498±1.10
ENST00000426003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427335 N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000444866 N/A N/A N/A 0.644±0.00 N/A N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A N/A
ENST00000463171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467131 N/A N/A N/A N/A N/A N/A N/A N/A 2.305±0.00 N/A N/A N/A N/A N/A
ENST00000470925 N/A N/A N/A N/A N/A 1.426±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490940 N/A N/A N/A N/A N/A N/A N/A N/A 1.022±0.00 N/A 0.124±0.00 N/A N/A 4.853±0.00
ENSG00000225764 ENST00000412203 0.743±0.00 1.508±0.00 N/A 1.893±0.00 0.692±0.00 0.472±0.40 0.801±0.25 1.395±0.00 0.225±0.00 0.862±0.58 0.201±0.00 0.690±0.19 0.530±0.31 1.676±0.48
ENSG00000230077 ENST00000437063 N/A 0.051±0.00 0.868±0.00 0.018±0.00 N/A 0.105±0.00 0.016±0.00 0.187±0.00 0.069±0.00 0.786±0.00 N/A 0.358±0.00 0.031±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022510 ENSMUST00000040231 N/A 0.007±0.00 14.236±1.28 0.263±0.15 1.626±0.71 0.003±0.00 0.097±0.00 0.167±0.05 0.023±0.01 2.034±0.22 0.414±0.08 0.653±0.22 0.248±0.27 0.221±0.00
ENSMUST00000065523 N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A 0.138±0.00 N/A 0.030±0.00 N/A
ENSMUST00000115304 N/A 0.007±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115305 0.766±0.18 0.042±0.00 N/A 0.158±0.06 2.246±0.30 0.058±0.02 0.088±0.00 N/A 0.047±0.00 N/A 0.697±0.01 0.613±0.10 0.958±1.13 N/A
ENSMUST00000115306 0.738±0.18 0.079±0.06 9.190±0.59 0.182±0.01 1.992±0.61 0.013±0.00 N/A 0.200±0.05 0.011±0.01 0.535±0.24 0.375±0.07 0.603±0.20 0.735±0.75 0.447±0.00
ENSMUST00000115307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115308 N/A N/A N/A N/A N/A N/A 0.244±0.00 N/A 0.007±0.00 N/A N/A 0.357±0.18 N/A 0.114±0.02
ENSMUST00000115310 N/A N/A N/A 0.034±0.00 N/A N/A 0.064±0.02 0.104±0.05 N/A 0.395±0.00 0.332±0.08 0.742±0.33 N/A 0.393±0.07
ENSMUSG00000038168 ENSMUST00000039990 2.211±1.54 2.976±0.29 3.156±1.12 0.394±0.05 1.405±0.65 4.060±0.70 0.550±0.04 27.687±5.76 0.522±0.37 3.857±0.20 0.845±0.40 7.113±2.48 7.849±3.80 0.222±0.10
ENSMUST00000159161 N/A N/A N/A 4.728±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.989±0.00
ENSMUST00000160067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.903±0.00 N/A 0.394±0.13
ENSMUST00000161878 N/A N/A N/A N/A N/A N/A N/A N/A 0.645±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000090203 ENSMUST00000159040 N/A N/A 0.022±0.00 0.040±0.00 N/A N/A N/A 0.197±0.08 0.013±0.00 0.072±0.00 N/A 0.032±0.00 0.056±0.02 N/A
ENSMUSG00000090257 ENSMUST00000161614 N/A N/A N/A 0.121±0.00 N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A
ENSMUSG00000098103 ENSMUST00000182783 N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00

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