C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435250 AC024082.3-001 ENSG00000231923 9606 + 7:138046654-138047897 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyTestisENST00000435250
Transcript ID Heart Kidney Testis
ENST00000435250 0.090±0.00 0.015±0.00 0.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Q5 CIL_0002Q5_0001 CGP 7:137874979-138117986
CIL_0002Q4 CIL_0002Q4_0001 CGP 7:138002324-138589993

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143850 Derl2-001 protein_coding Mus_musculus 0 220
ENSMUST00000108523 Derl2-002 protein_coding Mus_musculus 0 220
ENSMUST00000171041 Derl2-007 protein_coding Mus_musculus 0 219
ENSMUST00000131340 Derl2-004 nonsense_mediated_decay Mus_musculus 0 193
ENSMUST00000132198 Derl2-006 nonsense_mediated_decay Mus_musculus 0 193
ENSMUST00000018586 Derl2-005 nonsense_mediated_decay Mus_musculus 5.04467e-44 182
ENSMUST00000140712 Derl2-003 retained_intron Mus_musculus 1e-35 154

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