C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RasGEF domain family, member 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436139 RASGEF1B-003 ENSG00000138670 9606 - 4:81450893-81471890 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonHeartLungOvaryENST00000436139
Transcript ID Adrenal Bladder Colon Heart Lung Ovary
ENST00000436139 0.276±0.00 0.750±0.00 0.704±0.00 0.107±0.00 1.426±1.05 0.754±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000086 CIL_000086_0002 CGP 4:81087370-82044244
CIL_0008G8 CIL_0008G8_0001 VISTA 4:81293869-81895630

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005622 IEA intracellular
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168092 Rasgef1b-002 protein_coding Mus_musculus 0 503
ENSMUST00000031276 Rasgef1b-001 protein_coding Mus_musculus 0 503
ENSMUST00000127700 Coq7-003 retained_intron Mus_musculus 0.000000004 69

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