C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: high mobility group nucleosome binding domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436324 HMGN1-009 ENSG00000205581 9606 - 21:39342646-39349088 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KG CIL_0004KG_0001 CGP 21:39184176-39349647
CIL_0003GM CIL_0003GM_0001 CGP 21:39342315-39428528

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IEA chromatin
GO:0005634 IEA nucleus
GO:0031492 IEA nucleosomal DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050884 Hmgn1-001 protein_coding Mus_musculus 0 512
ENSMUST00000145713 Hmgn1-003 retained_intron Mus_musculus 0 281

Loading